diff --git a/src/Tools/cdtypes/src/types/time.rs b/src/Tools/cdtypes/src/types/time.rs
index 9e61d224..427bed4f 100644
--- a/src/Tools/cdtypes/src/types/time.rs
+++ b/src/Tools/cdtypes/src/types/time.rs
@@ -80,6 +80,10 @@ impl Time {
         self.sector as usize + self.second as usize*Self::MAX_SECTORS + self.minute as usize*Self::MAX_SECONDS*Self::MAX_SECTORS
     }
 
+    pub const fn get(&self) -> (i32, i32, i32) {
+        (self.minute as i32, self.second as i32, self.sector as i32)
+    }
+
     pub fn dump(&self) -> String {
         format!("min: {}, sec: {}, sector: {}", self.minute, self.second, self.sector)
     }
diff --git a/src/Tools/psxcdgen_ex/src/encoder/cd.rs b/src/Tools/psxcdgen_ex/src/encoder/cd.rs
index e915f5da..8b5390d6 100644
--- a/src/Tools/psxcdgen_ex/src/encoder/cd.rs
+++ b/src/Tools/psxcdgen_ex/src/encoder/cd.rs
@@ -1,7 +1,7 @@
-use super::{*, SectorWriter, {CDDesc, Error}};
+use super::{*, SectorWriter, {CDDATrack, CDDesc, Error}};
 use super::super::types::{FileType, helper::{DirectoryRecordMember, PathTableMember}, layout::Layout, *};
 use builder::SubModeBuilder;
-use cdtypes::types::{cdstring::{AString, DString}, date::*, dir_record::*, helper::{round_bytes_mode2_form1, sector_count_mode2_form1, sector_count_mode2_form2}, lsb_msb::*, path_table::*, pvd as cd_pvd, sector::{AudioSample, Mode2Form1}};
+use cdtypes::types::{cdstring::{AString, DString}, date::*, dir_record::*, helper::{round_bytes_mode2_form1, sector_count_mode2_form1, sector_count_mode2_form2}, lsb_msb::*, path_table::*, pvd as cd_pvd, sector::Mode2Form1};
 use tool_helper::{BufferedInputFile, format_if_error, open_input_file_buffered, print_warning};
 use std::io::{Read, Seek, SeekFrom};
 
@@ -420,13 +420,20 @@ fn process_lead_out(sectors: usize, sec_writer: &mut dyn SectorWriter) -> Result
 }
 
 fn process_end_dummy_section(padding: usize, sec_writer: &mut dyn SectorWriter) -> Result<(), Error> {
+    // The padding required for the PS3
     write_dummy(sec_writer, sector_count_mode2_form1(padding))
 }
 
-fn process_cd_da(cd_da_tracks: &Vec<Vec<AudioSample>>, sec_writer: &mut dyn SectorWriter) -> Result<(), Error> {
+fn process_cd_da(cd_da_tracks: &Vec<CDDATrack>, sec_writer: &mut dyn SectorWriter) -> Result<(), Error> {
     for cd_da_track in cd_da_tracks {
+        // The padding required for CDDA to start on a full second
+        if cd_da_track.align {
+            let missing_sectors = sec_writer.sectors_to_next_second();
+            write_dummy(sec_writer, missing_sectors)?;
+        }
+
         sec_writer.cd_da_start()?;
-        for audio in builder::create_audio_for_vec(cd_da_track) {
+        for audio in builder::create_audio_for_vec(&cd_da_track.samples) {
             sec_writer.write_audio(audio)?;
         }
     }
diff --git a/src/Tools/psxcdgen_ex/src/encoder/mod.rs b/src/Tools/psxcdgen_ex/src/encoder/mod.rs
index d93e18a2..8190a587 100644
--- a/src/Tools/psxcdgen_ex/src/encoder/mod.rs
+++ b/src/Tools/psxcdgen_ex/src/encoder/mod.rs
@@ -1,4 +1,4 @@
-use super::{file_writer::SectorWriter, types::{CDDesc, Error}};
+use super::{file_writer::SectorWriter, types::{CDDATrack, CDDesc, Error}};
 
 pub mod cd;
 pub mod builder;
diff --git a/src/Tools/psxcdgen_ex/src/file_writer/bin_cue.rs b/src/Tools/psxcdgen_ex/src/file_writer/bin_cue.rs
index b8f2ece2..50ae024a 100644
--- a/src/Tools/psxcdgen_ex/src/file_writer/bin_cue.rs
+++ b/src/Tools/psxcdgen_ex/src/file_writer/bin_cue.rs
@@ -51,7 +51,6 @@ impl SectorWriter for BinCueWriter {
         self.track += 1;
         self.cue.push(CueSpecifier::Track{number: self.track, data_type: CueDataType::Audio});
         
-
         if self.track == 2 {
             self.cue.push(CueSpecifier::PreGap{time: Time::cd_pregap()});
         }
@@ -63,4 +62,9 @@ impl SectorWriter for BinCueWriter {
         self.cue.push(CueSpecifier::Index{number: 1, time: self.cd_time.clone()});
         Ok(())
     }
+
+    fn sectors_to_next_second(&self) -> usize {
+        let (_, _, sectors) = self.cd_time.get();
+        Time::MAX_SECTORS - sectors as usize
+    }
 }
\ No newline at end of file
diff --git a/src/Tools/psxcdgen_ex/src/file_writer/mod.rs b/src/Tools/psxcdgen_ex/src/file_writer/mod.rs
index 4093d246..2e5fe115 100644
--- a/src/Tools/psxcdgen_ex/src/file_writer/mod.rs
+++ b/src/Tools/psxcdgen_ex/src/file_writer/mod.rs
@@ -46,6 +46,7 @@ pub trait SectorWriter {
 
     fn write(&mut self, sector: Sector) -> Result<usize, Error>;
     fn cd_da_start(&mut self)           -> Result<(), Error>;
+    fn sectors_to_next_second(&self)    -> usize;
 }
 
 pub fn write_image(cd_desc: &CDDesc, image_type: ImageType, mut output_path: PathBuf) -> Result<(), Error> {
diff --git a/src/Tools/psxcdgen_ex/src/lib.rs b/src/Tools/psxcdgen_ex/src/lib.rs
index 340e89ca..e8dfb484 100644
--- a/src/Tools/psxcdgen_ex/src/lib.rs
+++ b/src/Tools/psxcdgen_ex/src/lib.rs
@@ -10,7 +10,7 @@ use cdtypes::types::sector::AudioSample;
 use config_reader::LZ4State;
 use encoder::{cd::{self, calculate_lbas, calculate_length_for}, SizeInfo};
 use tool_helper::{format_if_error, Output, read_file};
-use types::{layout::Layout, CDDesc, Directory, File, FileType, FileSystemMap, Properties, SharedPtr};
+use types::{layout::Layout, CDDATrack, CDDesc, Directory, File, FileType, FileSystemMap, Properties, SharedPtr};
 use std::path::PathBuf;
 
 pub type LBAEmbeddedFiles     = Vec<SharedPtr<File>>;
@@ -204,7 +204,7 @@ fn parse_configuration(config: config_reader::Configuration) -> Result<(CDDesc,
         Ok(())
     }
 
-    fn parse_cd_da(cd_da_tracks: &mut Vec<Vec<AudioSample>>, cd_da_files: Vec<PathBuf>) -> Result<(), Error> {
+    fn parse_cd_da(cd_da_tracks: &mut Vec<CDDATrack>, cd_da_files: Vec<PathBuf>) -> Result<(), Error> {
         fn convert_into_16<R:std::io::Read, S:hound::Sample>(samples: hound::WavSamples<R,S>, file_path: &PathBuf) -> Result<Vec<AudioSample>, Error> {
             let mut sample_buffer = 0;
             let mut sample_id     = 0;
@@ -244,7 +244,7 @@ fn parse_configuration(config: config_reader::Configuration) -> Result<(CDDesc,
                 return Err(Error::from_text(format!("{}: Only a sampling rate of 44.1kHz is supported for Audio tracks", cd_da_file.display())));
             }
 
-            cd_da_tracks.push(convert_into_16(audio_io.samples::<i16>(), &cd_da_file)?);
+            cd_da_tracks.push(CDDATrack::new(convert_into_16(audio_io.samples::<i16>(), &cd_da_file)?, false));
         }
         Ok(())
     }
diff --git a/src/Tools/psxcdgen_ex/src/types/mod.rs b/src/Tools/psxcdgen_ex/src/types/mod.rs
index 67419ba5..f946776a 100644
--- a/src/Tools/psxcdgen_ex/src/types/mod.rs
+++ b/src/Tools/psxcdgen_ex/src/types/mod.rs
@@ -17,15 +17,26 @@ pub fn new_shared_ptr<T>(value: T) -> SharedPtr<T> {
     Rc::new(RefCell::new(value))
 }
 
+pub struct CDDATrack {
+    pub(super) samples: Vec<AudioSample>,
+    pub(super) align:   bool,
+}
+
+impl CDDATrack {
+    pub fn new(samples: Vec<AudioSample>, align: bool) -> CDDATrack {
+        CDDATrack{samples, align}
+    }
+}
+
 pub struct CDDesc {
     pub(super) system_area:       SharedPtr<SystemArea>,
     pub(super) path_table:        SharedPtr<PathTable>,
     pub(super) pvd:               SharedPtr<PrimaryVolumeDescriptor>,
     pub(super) root:              SharedPtr<Directory>,
-    pub(super) cd_da_tracks:      Vec<Vec<AudioSample>>,
+    pub(super) cd_da_tracks:      Vec<CDDATrack>,
     pub(super) vol_sector_count:  usize,
     pub        lead_out_sectors:  usize,
-    pub        end_dummy_padding: usize
+    pub        end_dummy_padding: usize,
 }
 
 impl CDDesc {